Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915811.1_cds_XP_016465562.1_58505
CDS Infomation

[gene=LOC107788394] [db_xref=GeneID:107788394] [protein=APO protein 2, chloroplastic-like] [protein_id=XP_016465562.1] [location=join(31022..31156,32500..32846,33342..34170)] [gbkey=CDS]
Sequence

ATGGATTGTGGCTGCCTACACTCCCAACTCAGTACCACAGTTTTAGTGTATAGCAAAGGG
AGAATTCAACCACCTAAAGTCAGAATTTTGAGATGCAATCCCCAGCATAATCTAAGTTCA
CTTGATTCTTTGAAGCAAAGTTGCAGTGGGGTGGCAGTTAAATTGAAGTTTAGAAGTCCA
TCAGAGAAGTTACATCCTGTCCAAGCCGCTGGTATTCGATGCGATCAACCGCAAAATGCA
GATTTGCCTCGTTACTATTCGAGGAAGGAGAAGAAGCCCTTCCCAATACCTATTGTGGAG
CTACGGAGAGCTGCGAGGGAGAGAATGAAAAATCGACTACCTAAAAGACGTGTGCCTCCA
CCAAAAATCGGATTGGTCATCAAAGGCCTAGTTCCTCTTGCATACAATGTGTTTAATGCA
CGGATAACAGTGATTAACAATCTCAAGCGGCTCTTGAAAGTGGTACCTGTTAATGGTTGC
AAGTGGTGTAACGAAATCCATGTGGGACCTGTTGGGCATCCTTTCAAGTCATGTAGAGGA
TCACAAGCTTCAAAACGCAAAGGACATCATGAGTGGGGAAAGGCAGTTCTTGAAGACATA
ATGGTGCCACTTGAATCCTACCATTTATATGATCGCCTAGGGAAACGAATTTCACATGAG
GAGAGATTTTCTATCCCTCGAATCCCTGCAGTAGTGGAGCTTTGTATCCAAGCAGGTGTT
GATATGCCTGAATATCCAACCAAGAGGAGAAGAAAACCAATCATATGGACCGGAAAAAAT
GAATTCGTTGATGCAGATGAAAGTGATTTGCCTGATCCCGAACCAGAATCTCCAATGCCT
CCAATTTTAACCGAGATACCAGATGCAGAGGTAGAACCACCGTCGAGTGCAGAAGAAACG
GTGTTGCTCGCTGAAGAAACACTCGAAGCGTGGGAAAGAATGAGAGTAGGAGCAAATAGG
CTGATGAAGATGTATCCGGTGAGAGTTTGCGGATACTGTCCGGAGGTACATGTTGGTCCA
AGCGGACACAAAGCACAAAACTGTGGAGCTCATAAGCACCAACAACGAAACGGGCAACAC
GGTTGGCAGACAGCAGTGCTAGATGATCTAATACCACCGAGATATGTGTGGCACGTTCCC
GATGTAAATCAACCATTGCAACGAGAGCTTCGGAGCTTCTATGGACAAGCTCCTGCAGTG
GTGGAAATATGTGTACAGGCTGGTGCTGAAGTCCCGGAGCAATACAAGCCAACTATGAGG
TTTGATGTGGGGATTCCTAGCAGTATCAAAGAAGCAGAAATGGTTGTTTAG

Peptide Sequence

PEP ID

XP_016465562.1
PEP Infomation

PREDICTED: APO protein 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MDCGCLHSQLSTTVLVYSKGRIQPPKVRILRCNPQHNLSSLDSLKQSCSGVAVKLKFRSP
SEKLHPVQAAGIRCDQPQNADLPRYYSRKEKKPFPIPIVELRRAARERMKNRLPKRRVPP
PKIGLVIKGLVPLAYNVFNARITVINNLKRLLKVVPVNGCKWCNEIHVGPVGHPFKSCRG
SQASKRKGHHEWGKAVLEDIMVPLESYHLYDRLGKRISHEERFSIPRIPAVVELCIQAGV
DMPEYPTKRRRKPIIWTGKNEFVDADESDLPDPEPESPMPPILTEIPDAEVEPPSSAEET
VLLAEETLEAWERMRVGANRLMKMYPVRVCGYCPEVHVGPSGHKAQNCGAHKHQQRNGQH
GWQTAVLDDLIPPRYVWHVPDVNQPLQRELRSFYGQAPAVVEICVQAGAEVPEQYKPTMR
FDVGIPSSIKEAEMVV

Transcript Sequence

Gene sequence data has not been registered.